* $genomicsService = new Google_Service_Genomics(...); * $coveragebuckets = $genomicsService->coveragebuckets; * */ class Google_Service_Genomics_Resource_ReadgroupsetsCoveragebuckets extends Google_Service_Resource { /** * Lists fixed width coverage buckets for a read group set, each of which * correspond to a range of a reference sequence. Each bucket summarizes * coverage information across its corresponding genomic range. * * Coverage is defined as the number of reads which are aligned to a given base * in the reference sequence. Coverage buckets are available at several * precomputed bucket widths, enabling retrieval of various coverage 'zoom * levels'. The caller must have READ permissions for the target read group set. * (coveragebuckets.listReadgroupsetsCoveragebuckets) * * @param string $readGroupSetId Required. The ID of the read group set over * which coverage is requested. * @param array $optParams Optional parameters. * * @opt_param int pageSize The maximum number of results to return in a single * page. If unspecified, defaults to 1024. The maximum value is 2048. * @opt_param string start The start position of the range on the reference, * 0-based inclusive. If specified, `referenceName` must also be specified. * Defaults to 0. * @opt_param string targetBucketWidth The desired width of each reported * coverage bucket in base pairs. This will be rounded down to the nearest * precomputed bucket width; the value of which is returned as `bucketWidth` in * the response. Defaults to infinity (each bucket spans an entire reference * sequence) or the length of the target range, if specified. The smallest * precomputed `bucketWidth` is currently 2048 base pairs; this is subject to * change. * @opt_param string referenceName The name of the reference to query, within * the reference set associated with this query. Optional. * @opt_param string end The end position of the range on the reference, 0-based * exclusive. If specified, `referenceName` must also be specified. If unset or * 0, defaults to the length of the reference. * @opt_param string pageToken The continuation token, which is used to page * through large result sets. To get the next page of results, set this * parameter to the value of `nextPageToken` from the previous response. * @return Google_Service_Genomics_ListCoverageBucketsResponse */ public function listReadgroupsetsCoveragebuckets($readGroupSetId, $optParams = array()) { $params = array('readGroupSetId' => $readGroupSetId); $params = array_merge($params, $optParams); return $this->call('list', array($params), "Google_Service_Genomics_ListCoverageBucketsResponse"); } }