* $genomicsService = new Google_Service_Genomics(...); * $reads = $genomicsService->reads; * */ class Google_Service_Genomics_Resource_Reads extends Google_Service_Resource { /** * Gets a list of reads for one or more read group sets. * * Reads search operates over a genomic coordinate space of reference sequence & * position defined over the reference sequences to which the requested read * group sets are aligned. * * If a target positional range is specified, search returns all reads whose * alignment to the reference genome overlap the range. A query which specifies * only read group set IDs yields all reads in those read group sets, including * unmapped reads. * * All reads returned (including reads on subsequent pages) are ordered by * genomic coordinate (by reference sequence, then position). Reads with * equivalent genomic coordinates are returned in an unspecified order. This * order is consistent, such that two queries for the same content (regardless * of page size) yield reads in the same order across their respective streams * of paginated responses. * * Implements [GlobalAllianceApi.searchReads](https://github.com/ga4gh/schemas/b * lob/v0.5.1/src/main/resources/avro/readmethods.avdl#L85). (reads.search) * * @param Google_Service_Genomics_SearchReadsRequest $postBody * @param array $optParams Optional parameters. * @return Google_Service_Genomics_SearchReadsResponse */ public function search(Google_Service_Genomics_SearchReadsRequest $postBody, $optParams = array()) { $params = array('postBody' => $postBody); $params = array_merge($params, $optParams); return $this->call('search', array($params), "Google_Service_Genomics_SearchReadsResponse"); } }