* $genomicsService = new Google_Service_Genomics(...); * $variantsets = $genomicsService->variantsets; * */ class Google_Service_Genomics_Resource_Variantsets extends Google_Service_Resource { /** * Creates a new variant set. * * The provided variant set must have a valid `datasetId` set - all other fields * are optional. Note that the `id` field will be ignored, as this is assigned * by the server. (variantsets.create) * * @param Google_Service_Genomics_VariantSet $postBody * @param array $optParams Optional parameters. * @return Google_Service_Genomics_VariantSet */ public function create(Google_Service_Genomics_VariantSet $postBody, $optParams = array()) { $params = array('postBody' => $postBody); $params = array_merge($params, $optParams); return $this->call('create', array($params), "Google_Service_Genomics_VariantSet"); } /** * Deletes a variant set including all variants, call sets, and calls within. * This is not reversible. (variantsets.delete) * * @param string $variantSetId The ID of the variant set to be deleted. * @param array $optParams Optional parameters. * @return Google_Service_Genomics_GenomicsEmpty */ public function delete($variantSetId, $optParams = array()) { $params = array('variantSetId' => $variantSetId); $params = array_merge($params, $optParams); return $this->call('delete', array($params), "Google_Service_Genomics_GenomicsEmpty"); } /** * Exports variant set data to an external destination. (variantsets.export) * * @param string $variantSetId Required. The ID of the variant set that contains * variant data which should be exported. The caller must have READ access to * this variant set. * @param Google_Service_Genomics_ExportVariantSetRequest $postBody * @param array $optParams Optional parameters. * @return Google_Service_Genomics_Operation */ public function export($variantSetId, Google_Service_Genomics_ExportVariantSetRequest $postBody, $optParams = array()) { $params = array('variantSetId' => $variantSetId, 'postBody' => $postBody); $params = array_merge($params, $optParams); return $this->call('export', array($params), "Google_Service_Genomics_Operation"); } /** * Gets a variant set by ID. (variantsets.get) * * @param string $variantSetId Required. The ID of the variant set. * @param array $optParams Optional parameters. * @return Google_Service_Genomics_VariantSet */ public function get($variantSetId, $optParams = array()) { $params = array('variantSetId' => $variantSetId); $params = array_merge($params, $optParams); return $this->call('get', array($params), "Google_Service_Genomics_VariantSet"); } /** * Updates a variant set using patch semantics. (variantsets.patch) * * @param string $variantSetId The ID of the variant to be updated (must already * exist). * @param Google_Service_Genomics_VariantSet $postBody * @param array $optParams Optional parameters. * * @opt_param string updateMask An optional mask specifying which fields to * update. Supported fields: * * * metadata. * name. * description. * * Leaving `updateMask` unset is equivalent to specifying all mutable fields. * @return Google_Service_Genomics_VariantSet */ public function patch($variantSetId, Google_Service_Genomics_VariantSet $postBody, $optParams = array()) { $params = array('variantSetId' => $variantSetId, 'postBody' => $postBody); $params = array_merge($params, $optParams); return $this->call('patch', array($params), "Google_Service_Genomics_VariantSet"); } /** * Returns a list of all variant sets matching search criteria. * * Implements [GlobalAllianceApi.searchVariantSets](https://github.com/ga4gh/sch * emas/blob/v0.5.1/src/main/resources/avro/variantmethods.avdl#L49). * (variantsets.search) * * @param Google_Service_Genomics_SearchVariantSetsRequest $postBody * @param array $optParams Optional parameters. * @return Google_Service_Genomics_SearchVariantSetsResponse */ public function search(Google_Service_Genomics_SearchVariantSetsRequest $postBody, $optParams = array()) { $params = array('postBody' => $postBody); $params = array_merge($params, $optParams); return $this->call('search', array($params), "Google_Service_Genomics_SearchVariantSetsResponse"); } }